Index

B

built-in function src.monarchs.core.configuration.create_defaults_for_missing_flags() src.monarchs.core.configuration.create_output_folders() src.monarchs.core.configuration.handle_incompatible_flags() src.monarchs.core.configuration.jit_classes() src.monarchs.core.configuration.jit_modules() src.monarchs.core.configuration.parse_args() src.monarchs.core.driver.check_firn_met_consistency() src.monarchs.core.driver.check_for_reload_from_dump() src.monarchs.core.driver.get_num_cores() src.monarchs.core.driver.initialise() src.monarchs.core.driver.main() src.monarchs.core.driver.monarchs() src.monarchs.core.driver.print_model_end_of_timestep_messages() src.monarchs.core.driver.setup_toggle_dict() src.monarchs.core.driver.update_met_conditions() src.monarchs.core.dump_model_state.dump_state() src.monarchs.core.dump_model_state.reload_from_dump() src.monarchs.core.iceshelf_class.get_spec() src.monarchs.core.initial_conditions.check_for_isolated_cells() src.monarchs.core.initial_conditions.create_model_grid() src.monarchs.core.initial_conditions.initialise_firn_profile() src.monarchs.core.initial_conditions.rho_init_emp() src.monarchs.core.loop_over_grid.loop_over_grid() src.monarchs.core.model_output.setup_output() src.monarchs.core.model_output.update_model_output() src.monarchs.core.Numba.loop_over_grid.loop_over_grid_numba() src.monarchs.core.utils.add_edge_water() src.monarchs.core.utils.add_random_water() src.monarchs.core.utils.calc_grid_mass() src.monarchs.core.utils.calc_mass_sum() src.monarchs.core.utils.check_correct() src.monarchs.core.utils.check_energy_conservation() src.monarchs.core.utils.do_not_jit() src.monarchs.core.utils.find_nearest() src.monarchs.core.utils.get_2d_grid() src.monarchs.core.utils.spinup() src.monarchs.DEM.create_DEM_GaussianTestCase.export_gaussian_DEM() src.monarchs.DEM.load_DEM.bounding_box_diagnostic_plots() src.monarchs.DEM.load_DEM.export_DEM() src.monarchs.DEM.load_DEM.generate_diagnostic_plots() src.monarchs.DEM.load_DEM.get_xy_distance() src.monarchs.DEM.load_DEM.interpolate_DEM() src.monarchs.physics.firn_functions.calc_height_change() src.monarchs.physics.firn_functions.firn_column() src.monarchs.physics.firn_functions.interp_nb() src.monarchs.physics.firn_functions.regrid_after_melt() src.monarchs.physics.heateqn.heateqn() src.monarchs.physics.heateqn.heateqn_fixedsfc() src.monarchs.physics.heateqn.heateqn_lid() src.monarchs.physics.lake_functions.lake_development() src.monarchs.physics.lake_functions.lake_formation() src.monarchs.physics.lake_functions.sfc_energy_lake() src.monarchs.physics.lake_functions.sfc_energy_lake_formation() src.monarchs.physics.lake_functions.turbulent_mixing() src.monarchs.physics.lateral_functions.calc_available_water() src.monarchs.physics.lateral_functions.calc_catchment_outflow() src.monarchs.physics.lateral_functions.find_biggest_neighbour() src.monarchs.physics.lateral_functions.get_neighbour_water_levels() src.monarchs.physics.lateral_functions.move_to_neighbours() src.monarchs.physics.lateral_functions.move_water() src.monarchs.physics.lateral_functions.update_water_level() src.monarchs.physics.lateral_functions.water_fraction() src.monarchs.physics.lid_functions.calc_surface_melt() src.monarchs.physics.lid_functions.combine_lid_firn() src.monarchs.physics.lid_functions.interpolate_profiles() src.monarchs.physics.lid_functions.lid_development() src.monarchs.physics.lid_functions.virtual_lid() src.monarchs.physics.Numba.extract_args.extract_args() src.monarchs.physics.Numba.extract_args.extract_args_fixedsfc() src.monarchs.physics.Numba.extract_args.extract_args_lid() src.monarchs.physics.Numba.heateqn_nb.heateqn() src.monarchs.physics.Numba.heateqn_nb.heateqn_fixedsfc() src.monarchs.physics.Numba.heateqn_nb.heateqn_lid() src.monarchs.physics.Numba.solver.args_array() src.monarchs.physics.Numba.solver.firn_heateqn_solver() src.monarchs.physics.Numba.solver.lake_development_eqn() src.monarchs.physics.Numba.solver.lake_formation_eqn() src.monarchs.physics.Numba.solver.lake_solver() src.monarchs.physics.Numba.solver.lid_heateqn_solver() src.monarchs.physics.Numba.solver.lid_seb_solver() src.monarchs.physics.Numba.solver.sfc_energy_lid() src.monarchs.physics.Numba.solver.sfc_energy_virtual_lid() src.monarchs.physics.percolation_functions.calc_liquid_mass() src.monarchs.physics.percolation_functions.calc_refreezing() src.monarchs.physics.percolation_functions.calc_saturation() src.monarchs.physics.percolation_functions.calc_solid_mass() src.monarchs.physics.percolation_functions.capillary() src.monarchs.physics.percolation_functions.perc_time() src.monarchs.physics.percolation_functions.percolation() src.monarchs.physics.snow_accumulation.densification() src.monarchs.physics.snow_accumulation.snowfall() src.monarchs.physics.solver.firn_heateqn_solver() src.monarchs.physics.solver.lake_development_eqn() src.monarchs.physics.solver.lake_formation_eqn() src.monarchs.physics.solver.lake_solver() src.monarchs.physics.solver.lid_heateqn_solver() src.monarchs.physics.solver.lid_seb_solver() src.monarchs.physics.solver.sfc_energy_lid() src.monarchs.physics.solver.sfc_energy_virtual_lid() src.monarchs.physics.surface_fluxes.bulk_fluxes() src.monarchs.physics.surface_fluxes.sfc_albedo() src.monarchs.physics.surface_fluxes.sfc_flux() src.monarchs.physics.timestep.timestep_loop()

C

cbar (in module src.monarchs.DEM.RBIS_DEM) column (src.monarchs.core.iceshelf_class.IceShelf attribute)

cores (in module src.monarchs.core.driver) cp_air (src.monarchs.core.iceshelf_class.IceShelf attribute) cp_water (src.monarchs.core.iceshelf_class.IceShelf attribute)

D

day (src.monarchs.core.iceshelf_class.IceShelf attribute) DEM_grid (in module src.monarchs.DEM.RBIS_DEM)

dev_eqn_cfunc (in module src.monarchs.physics.Numba.solver) dev_eqnaddress (in module src.monarchs.physics.Numba.solver)

E

exposed_water (src.monarchs.core.iceshelf_class.IceShelf attribute) exposed_water_refreeze_counter (src.monarchs.core.iceshelf_class.IceShelf attribute)

extract_args (in module src.monarchs.physics.Numba.extract_args) extract_args_fixedsfc (in module src.monarchs.physics.Numba.extract_args) extract_args_lid (in module src.monarchs.physics.Numba.extract_args)

F

fig (in module src.monarchs.DEM.RBIS_DEM) firn_depth (src.monarchs.core.iceshelf_class.IceShelf attribute) firn_temperature (src.monarchs.core.iceshelf_class.IceShelf attribute)

font (in module src.monarchs.DEM.RBIS_DEM) form_eqn_cfunc (in module src.monarchs.physics.Numba.solver) form_eqnaddress (in module src.monarchs.physics.Numba.solver)

G

gt (in module src.monarchs.DEM.Read_DEM_coords)

H

h (in module src.monarchs.DEM.create_DEM_GaussianTestCase) has_had_lid (src.monarchs.core.iceshelf_class.IceShelf attribute) heateqn (in module src.monarchs.physics.Numba.heateqn_nb) heateqn_fixedsfc (in module src.monarchs.physics.Numba.heateqn_nb) heateqn_lid (in module src.monarchs.physics.Numba.heateqn_nb)

heights (in module src.monarchs.DEM.RBIS_DEM) (in module src.monarchs.DEM.Read_DEM_coords) heq (in module src.monarchs.physics.Numba.solver) heqfs (in module src.monarchs.physics.Numba.solver) heqlid (in module src.monarchs.physics.Numba.solver)

I

ice_lens (src.monarchs.core.iceshelf_class.IceShelf attribute) ice_lens_depth (src.monarchs.core.iceshelf_class.IceShelf attribute)

im (in module src.monarchs.DEM.RBIS_DEM) interp (in module src.monarchs.DEM.interpolation_test)

K

k_air (src.monarchs.core.iceshelf_class.IceShelf attribute)

k_water (src.monarchs.core.iceshelf_class.IceShelf attribute)

L

L_ice (src.monarchs.core.iceshelf_class.IceShelf attribute) lake (src.monarchs.core.iceshelf_class.IceShelf attribute) (src.monarchs.physics.lateral_functions.TemporaryCell attribute) lake_depth (src.monarchs.core.iceshelf_class.IceShelf attribute) (src.monarchs.physics.lateral_functions.TemporaryCell attribute) lat (src.monarchs.core.iceshelf_class.IceShelf attribute)

lid (src.monarchs.core.iceshelf_class.IceShelf attribute) lid_depth (src.monarchs.core.iceshelf_class.IceShelf attribute) lid_melt_count (src.monarchs.core.iceshelf_class.IceShelf attribute) lid_sfc_melt (src.monarchs.core.iceshelf_class.IceShelf attribute) log (src.monarchs.core.iceshelf_class.IceShelf attribute) lon (src.monarchs.core.iceshelf_class.IceShelf attribute)

M

max_grid_col (in module src.monarchs.DEM.RBIS_DEM) max_grid_row (in module src.monarchs.DEM.RBIS_DEM) melt (src.monarchs.core.iceshelf_class.IceShelf attribute) melt_hours (src.monarchs.core.iceshelf_class.IceShelf attribute) meltflag (src.monarchs.physics.lateral_functions.TemporaryCell attribute) meta_dict (in module src.monarchs.DEM.RBIS_DEM) model_setup (in module src.monarchs.core.configuration) (in module src.monarchs.core.driver) model_setup_path (in module src.monarchs.core.configuration) module src.monarchs src.monarchs.core src.monarchs.core.configuration src.monarchs.core.driver src.monarchs.core.dump_model_state src.monarchs.core.iceshelf_class src.monarchs.core.initial_conditions src.monarchs.core.loop_over_grid src.monarchs.core.model_output src.monarchs.core.Numba src.monarchs.core.Numba.loop_over_grid src.monarchs.core.utils src.monarchs.DEM src.monarchs.DEM.create_DEM_GaussianTestCase src.monarchs.DEM.interpolation_test src.monarchs.DEM.load_DEM src.monarchs.DEM.RBIS_DEM src.monarchs.DEM.Read_DEM_coords src.monarchs.physics src.monarchs.physics.firn_functions src.monarchs.physics.heateqn src.monarchs.physics.lake_functions src.monarchs.physics.lateral_functions src.monarchs.physics.lid_functions src.monarchs.physics.Numba src.monarchs.physics.Numba.extract_args src.monarchs.physics.Numba.heateqn_nb src.monarchs.physics.Numba.solver src.monarchs.physics.percolation_functions src.monarchs.physics.snow_accumulation src.monarchs.physics.solver src.monarchs.physics.surface_fluxes src.monarchs.physics.timestep

mpi (in module src.monarchs.core.configuration)

P

pore_closure (src.monarchs.core.iceshelf_class.IceShelf attribute)

R

reset_combine (src.monarchs.core.iceshelf_class.IceShelf attribute) rho (src.monarchs.core.iceshelf_class.IceShelf attribute) rho_ice (src.monarchs.core.iceshelf_class.IceShelf attribute)

rho_lid (src.monarchs.core.iceshelf_class.IceShelf attribute) rho_water (src.monarchs.core.iceshelf_class.IceShelf attribute) rng (in module src.monarchs.DEM.interpolation_test) row (src.monarchs.core.iceshelf_class.IceShelf attribute)

S

saturation (src.monarchs.physics.lateral_functions.TemporaryCell attribute) sfc_energy_lid (in module src.monarchs.physics.Numba.solver) sfc_energy_lid_address (in module src.monarchs.physics.Numba.solver) sfc_energy_virtual_lid (in module src.monarchs.physics.Numba.solver) sfc_energy_vlid_address (in module src.monarchs.physics.Numba.solver) size_dx (src.monarchs.core.iceshelf_class.IceShelf attribute) size_dy (src.monarchs.core.iceshelf_class.IceShelf attribute) snow_added (src.monarchs.core.iceshelf_class.IceShelf attribute) src.monarchs module src.monarchs.core module src.monarchs.core.configuration module src.monarchs.core.configuration.create_defaults_for_missing_flags() built-in function src.monarchs.core.configuration.create_output_folders() built-in function src.monarchs.core.configuration.handle_incompatible_flags() built-in function src.monarchs.core.configuration.jit_classes() built-in function src.monarchs.core.configuration.jit_modules() built-in function src.monarchs.core.configuration.ModelSetup (built-in class) src.monarchs.core.configuration.parse_args() built-in function src.monarchs.core.driver module src.monarchs.core.driver.check_firn_met_consistency() built-in function src.monarchs.core.driver.check_for_reload_from_dump() built-in function src.monarchs.core.driver.get_num_cores() built-in function src.monarchs.core.driver.initialise() built-in function src.monarchs.core.driver.main() built-in function src.monarchs.core.driver.monarchs() built-in function src.monarchs.core.driver.print_model_end_of_timestep_messages() built-in function src.monarchs.core.driver.setup_toggle_dict() built-in function src.monarchs.core.driver.update_met_conditions() built-in function src.monarchs.core.dump_model_state module src.monarchs.core.dump_model_state.dump_state() built-in function src.monarchs.core.dump_model_state.reload_from_dump() built-in function src.monarchs.core.iceshelf_class module src.monarchs.core.iceshelf_class.get_spec() built-in function src.monarchs.core.iceshelf_class.IceShelf (built-in class) src.monarchs.core.initial_conditions module src.monarchs.core.initial_conditions.check_for_isolated_cells() built-in function src.monarchs.core.initial_conditions.create_model_grid() built-in function src.monarchs.core.initial_conditions.initialise_firn_profile() built-in function src.monarchs.core.initial_conditions.rho_init_emp() built-in function src.monarchs.core.loop_over_grid module src.monarchs.core.loop_over_grid.loop_over_grid() built-in function src.monarchs.core.model_output module src.monarchs.core.model_output.setup_output() built-in function src.monarchs.core.model_output.update_model_output() built-in function src.monarchs.core.Numba module src.monarchs.core.Numba.loop_over_grid module src.monarchs.core.Numba.loop_over_grid.loop_over_grid_numba() built-in function src.monarchs.core.utils module src.monarchs.core.utils.add_edge_water() built-in function src.monarchs.core.utils.add_random_water() built-in function src.monarchs.core.utils.calc_grid_mass() built-in function src.monarchs.core.utils.calc_mass_sum() built-in function src.monarchs.core.utils.check_correct() built-in function src.monarchs.core.utils.check_energy_conservation() built-in function src.monarchs.core.utils.do_not_jit() built-in function src.monarchs.core.utils.find_nearest() built-in function src.monarchs.core.utils.get_2d_grid() built-in function src.monarchs.core.utils.spinup() built-in function src.monarchs.DEM module src.monarchs.DEM.create_DEM_GaussianTestCase module src.monarchs.DEM.create_DEM_GaussianTestCase.export_gaussian_DEM() built-in function src.monarchs.DEM.interpolation_test module src.monarchs.DEM.load_DEM module src.monarchs.DEM.load_DEM.bounding_box_diagnostic_plots() built-in function src.monarchs.DEM.load_DEM.export_DEM() built-in function src.monarchs.DEM.load_DEM.generate_diagnostic_plots() built-in function src.monarchs.DEM.load_DEM.get_xy_distance() built-in function src.monarchs.DEM.load_DEM.interpolate_DEM() built-in function src.monarchs.DEM.RBIS_DEM module src.monarchs.DEM.Read_DEM_coords module src.monarchs.physics module src.monarchs.physics.firn_functions module src.monarchs.physics.firn_functions.calc_height_change() built-in function src.monarchs.physics.firn_functions.firn_column() built-in function src.monarchs.physics.firn_functions.interp_nb() built-in function src.monarchs.physics.firn_functions.regrid_after_melt() built-in function

src.monarchs.physics.heateqn module src.monarchs.physics.heateqn.heateqn() built-in function src.monarchs.physics.heateqn.heateqn_fixedsfc() built-in function src.monarchs.physics.heateqn.heateqn_lid() built-in function src.monarchs.physics.lake_functions module src.monarchs.physics.lake_functions.lake_development() built-in function src.monarchs.physics.lake_functions.lake_formation() built-in function src.monarchs.physics.lake_functions.sfc_energy_lake() built-in function src.monarchs.physics.lake_functions.sfc_energy_lake_formation() built-in function src.monarchs.physics.lake_functions.turbulent_mixing() built-in function src.monarchs.physics.lateral_functions module src.monarchs.physics.lateral_functions.calc_available_water() built-in function src.monarchs.physics.lateral_functions.calc_catchment_outflow() built-in function src.monarchs.physics.lateral_functions.find_biggest_neighbour() built-in function src.monarchs.physics.lateral_functions.get_neighbour_water_levels() built-in function src.monarchs.physics.lateral_functions.move_to_neighbours() built-in function src.monarchs.physics.lateral_functions.move_water() built-in function src.monarchs.physics.lateral_functions.TemporaryCell (built-in class) src.monarchs.physics.lateral_functions.update_water_level() built-in function src.monarchs.physics.lateral_functions.water_fraction() built-in function src.monarchs.physics.lid_functions module src.monarchs.physics.lid_functions.calc_surface_melt() built-in function src.monarchs.physics.lid_functions.combine_lid_firn() built-in function src.monarchs.physics.lid_functions.interpolate_profiles() built-in function src.monarchs.physics.lid_functions.lid_development() built-in function src.monarchs.physics.lid_functions.virtual_lid() built-in function src.monarchs.physics.Numba module src.monarchs.physics.Numba.extract_args module src.monarchs.physics.Numba.extract_args.extract_args() built-in function src.monarchs.physics.Numba.extract_args.extract_args_fixedsfc() built-in function src.monarchs.physics.Numba.extract_args.extract_args_lid() built-in function src.monarchs.physics.Numba.heateqn_nb module src.monarchs.physics.Numba.heateqn_nb.heateqn() built-in function src.monarchs.physics.Numba.heateqn_nb.heateqn_fixedsfc() built-in function src.monarchs.physics.Numba.heateqn_nb.heateqn_lid() built-in function src.monarchs.physics.Numba.solver module src.monarchs.physics.Numba.solver.args_array() built-in function src.monarchs.physics.Numba.solver.firn_heateqn_solver() built-in function src.monarchs.physics.Numba.solver.lake_development_eqn() built-in function src.monarchs.physics.Numba.solver.lake_formation_eqn() built-in function src.monarchs.physics.Numba.solver.lake_solver() built-in function src.monarchs.physics.Numba.solver.lid_heateqn_solver() built-in function src.monarchs.physics.Numba.solver.lid_seb_solver() built-in function src.monarchs.physics.Numba.solver.sfc_energy_lid() built-in function src.monarchs.physics.Numba.solver.sfc_energy_virtual_lid() built-in function src.monarchs.physics.percolation_functions module src.monarchs.physics.percolation_functions.calc_liquid_mass() built-in function src.monarchs.physics.percolation_functions.calc_refreezing() built-in function src.monarchs.physics.percolation_functions.calc_saturation() built-in function src.monarchs.physics.percolation_functions.calc_solid_mass() built-in function src.monarchs.physics.percolation_functions.capillary() built-in function src.monarchs.physics.percolation_functions.perc_time() built-in function src.monarchs.physics.percolation_functions.percolation() built-in function src.monarchs.physics.snow_accumulation module src.monarchs.physics.snow_accumulation.densification() built-in function src.monarchs.physics.snow_accumulation.snowfall() built-in function src.monarchs.physics.solver module src.monarchs.physics.solver.firn_heateqn_solver() built-in function src.monarchs.physics.solver.lake_development_eqn() built-in function src.monarchs.physics.solver.lake_formation_eqn() built-in function src.monarchs.physics.solver.lake_solver() built-in function src.monarchs.physics.solver.lid_heateqn_solver() built-in function src.monarchs.physics.solver.lid_seb_solver() built-in function src.monarchs.physics.solver.sfc_energy_lid() built-in function src.monarchs.physics.solver.sfc_energy_virtual_lid() built-in function src.monarchs.physics.surface_fluxes module src.monarchs.physics.surface_fluxes.bulk_fluxes() built-in function src.monarchs.physics.surface_fluxes.sfc_albedo() built-in function src.monarchs.physics.surface_fluxes.sfc_flux() built-in function src.monarchs.physics.timestep module src.monarchs.physics.timestep.timestep_loop() built-in function

T

t_step (src.monarchs.core.iceshelf_class.IceShelf attribute) tiffname (in module src.monarchs.DEM.load_DEM) (in module src.monarchs.DEM.RBIS_DEM) (in module src.monarchs.DEM.Read_DEM_coords)

total_melt (src.monarchs.core.iceshelf_class.IceShelf attribute)

V

v_lid (src.monarchs.core.iceshelf_class.IceShelf attribute) v_lid_depth (src.monarchs.core.iceshelf_class.IceShelf attribute) valid_cell (src.monarchs.core.iceshelf_class.IceShelf attribute) vert_grid (src.monarchs.core.iceshelf_class.IceShelf attribute)

vert_grid_lake (src.monarchs.core.iceshelf_class.IceShelf attribute) vert_grid_lid (src.monarchs.core.iceshelf_class.IceShelf attribute) vertical_profile (src.monarchs.core.iceshelf_class.IceShelf attribute) virtual_lid_temperature (src.monarchs.core.iceshelf_class.IceShelf attribute)

W

water (in module src.monarchs.DEM.RBIS_DEM), [1] (src.monarchs.physics.lateral_functions.TemporaryCell attribute)

water_level (in module src.monarchs.DEM.RBIS_DEM) (src.monarchs.core.iceshelf_class.IceShelf attribute)

X

X (in module src.monarchs.DEM.interpolation_test)

x (in module src.monarchs.DEM.interpolation_test)

Y

Y (in module src.monarchs.DEM.interpolation_test)

y (in module src.monarchs.DEM.interpolation_test)

Z

Z (in module src.monarchs.DEM.interpolation_test)

z (in module src.monarchs.DEM.interpolation_test)